STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetCTetR family transcriptional regulator. (205 aa)    
Predicted Functional Partners:
CUO06314.1
Conserved hypothetical integral membrane protein TIGR02185.
 
     0.877
irtA_1
Transport protein%2C ATPase and permease.
 
     0.872
msbA_1
Putative ABC transporter ATP-binding/permease.
 
     0.868
ecfT_4
Transporter.
 
     0.867
ykoD_3
Transporter.
 
     0.858
CUO86145.1
Conserved hypothetical integral membrane protein TIGR02185.
 
     0.704
ykoD_4
Transporter.
  
     0.685
ecfT_5
Transporter.
  
     0.685
CUO86067.1
ABC transporter ATP-binding protein/permease.
  
     0.660
irtA_2
ABC transporter.
  
     0.654
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.