STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP39321.1Mu-like prophage protein gp36. (149 aa)    
Predicted Functional Partners:
CUP39303.1
Mu-like prophage protein gpG.
 
    0.956
CUP39350.1
Mu-like prophage major head subunit gpT.
 
  
 0.939
CUP39395.1
Mu-like prophage I protein.
 
   
 0.924
CUP39368.1
Uncharacterised protein.
 
     0.920
CUP39447.1
Mu-like prophage protein gp29.
 
   
 0.878
CUP39473.1
Phage uncharacterized protein%2C C-terminal domain.
 
     0.873
CUP39420.1
Phage head morphogenesis protein%2C SPP1 gp7 family.
 
     0.869
CUP39270.1
Uncharacterised protein.
       0.807
CUP39100.1
TMP repeat family.
 
     0.798
CUP39216.1
Protein of uncharacterised function (DUF2586).
       0.796
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.