STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08895.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AIS08894.1
Regulatory protein RecX.
       0.796
AIS08596.1
Hypothetical protein.
  
     0.772
AIS09147.1
Hypothetical protein.
  
     0.768
AIS09601.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
     0.768
AIS08468.1
Hypothetical protein.
  
     0.764
AIS09100.1
Rod shape-determining protein MreD.
  
     0.756
AIS09864.1
Hypothetical protein.
  
     0.754
AIS09725.1
Hypothetical protein.
  
     0.749
AIS08502.1
Transcriptional regulator, TetR family.
  
     0.745
AIS08337.1
Hypothetical protein.
  
     0.743
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.