STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08953.1Hypothetical protein. (508 aa)    
Predicted Functional Partners:
AIS08954.1
Hypothetical protein.
       0.727
AIS08328.1
DNA gyrase subunit B.
   
 
 0.644
AIS09193.1
Topoisomerase IV subunit B.
   
 
 0.644
AIS08623.1
Peptidoglycan-binding LysM.
   
 
 0.582
AIS09172.1
Endopeptidase lytF precursor.
   
 
 0.582
AIS08955.1
Lantibiotic transport ATP-binding protein srtF.
     
 0.533
AIS08956.1
Lantibiotic ABC transporter.
       0.523
AIS08957.1
Lantibiotic ABC transporter.
       0.523
AIS08952.1
Amino acid permease.
  
    0.516
AIS08445.1
Hypothetical protein.
   
   0.496
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.