STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISF6_2835Transcriptional regulator, GntR family. (245 aa)    
Predicted Functional Partners:
ISF6_3007
Transcriptional regulator, GntR family.
  
    0.761
ISF6_4115
Transcriptional regulator, GntR family.
  
    0.724
ISF6_4113
Transcriptional regulator, GntR family.
  
    0.674
ISF6_4331
Transcriptional regulator, GntR family.
  
    0.637
ISF6_2834
Hypothetical protein.
       0.522
ISF6_2836
Exodeoxyribonuclease III.
       0.519
ISF6_2833
Hypothetical protein.
       0.443
ISF6_0215
protein-N(5)-glutamine methyltransferase PrmB; Methylates LSU ribosomal protein L3p; Belongs to the protein N5-glutamine methyltransferase family.
    
   0.426
Your Current Organism:
Ideonella sakaiensis
NCBI taxonomy Id: 1547922
Other names: I. sakaiensis, Ideonella sakaiensis Tanasupawat et al. 2016, Ideonella sp. 201-F6, NBRC 110686, TISTR 2288, strain 201-F6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.