STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANO50572.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
ANO50573.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
ANO50574.1
Ureidoglycolate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.869
ANO52990.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.810
ANO50571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.791
ANO52991.1
Fuconate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.704
ANO53144.1
YciK family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
ANO50570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.574
ANO53357.1
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.497
ANO52947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.484
ANO51404.1
Malonyl CoA-acyl carrier protein transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.411
Your Current Organism:
Woeseia oceani
NCBI taxonomy Id: 1548547
Other names: ATCC BAA-2615, CICC 10905, W. oceani, Woeseia oceani Du et al. 2016, gamma proteobacterium XK5, strain XK5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.