STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1IU34ATP-dependent RNA helicase DBP10. (820 aa)    
Predicted Functional Partners:
A0A4P9XEY1
BRCT domain-containing protein.
   
 0.970
A0A4P9X8I8
CP-type G domain-containing protein.
  
 0.966
A0A4P9XC95
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.965
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.958
A0A4V1IUP9
Sas10 domain-containing protein.
   
  0.941
CXG81DRAFT_50
FtsJ-domain-containing protein.
   
 0.937
A0A4V1IUD0
Brix domain-containing protein.
   
   0.933
A0A4V1IVI8
Uncharacterized protein.
   
 0.932
A0A4P9X4H0
Uncharacterized protein.
   
 
 0.930
A0A4P9X5A7
WD_REPEATS_REGION domain-containing protein.
   
 0.926
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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