STRINGSTRING
yedQ protein (Escherichia coli O157H7) - STRING interaction network
"yedQ" - Cellulose synthesis regulatory protein in Escherichia coli O157H7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yedQCellulose synthesis regulatory protein; Involves in the regulation of cellulose production (564 aa)    
Predicted Functional Partners:
yciR
Uncharacterized protein; Corresponds to locus_tag Z2516 (632 aa)
0.921
ECs2876
Uncharacterized protein; FIG00639031 (935 aa)
 
0.918
ECs1691
Uncharacterized protein; Corresponds to locus_tag Z1959 (198 aa)
         
  0.913
ECs5043
Uncharacterized protein; Corresponds to locus_tag Z5660; FIG00638940 (528 aa)
 
     
  0.874
ECs2524
Uncharacterized protein; Corresponds to locus_tag Z2858 (532 aa)
 
  0.863
AIG69131.1
annotation not available (62 aa)
              0.845
ECs3273
Uncharacterized protein; Corresponds to locus_tag Z3660; FIG00638309 (729 aa)
 
 
  0.822
rtn
Uncharacterized protein; Corresponds to locus_tag Z3435 (497 aa)
 
  0.810
ylaB
Uncharacterized protein; Corresponds to locus_tag Z0569 (516 aa)
 
     
  0.778
ECs4409
Uncharacterized protein; Corresponds to locus_tag Z4943 (649 aa)
 
  0.767
Your Current Organism:
Escherichia coli O157H7
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933, Escherichia coli O157H7
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