STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pflAPyruvate formate lyase activating enzyme 1; Activation of pyruvate formate-lyase 1 under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa)    
Predicted Functional Partners:
pflB
Formate acetyltransferase 1; Residues 1 to 760 of 760 are 99.47 pct identical to residues 1 to 760 of 760 from Escherichia coli K-12 Strain MG1655: B0903.
  
 0.992
tdcE
Probable formate acetyltransferase 3; Residues 1 to 741 of 764 are 99.86 pct identical to residues 1 to 741 of 746 from Escherichia coli K-12 Strain MG1655: B3114.
  
 0.972
yfiD
Putative formate acetyltransferase; Acts as a radical domain for damaged PFL and possibly other radical proteins.
  
   
 0.833
pflD
Formate acetyltransferase 2; Residues 1 to 765 of 765 are 98.82 pct identical to residues 1 to 765 of 765 from Escherichia coli K-12 Strain MG1655: B3951.
 
  
 0.817
Z1045
Putative pyruvate formate-lyase 2; Residues 1 to 599 of 599 are 98.66 pct identical to residues 212 to 810 of 810 from Escherichia coli K-12 Strain MG1655: B0823.
 
  
 0.814
ydbK
Putative oxidoreductase, Fe-S subunit; Residues 1 to 1174 of 1174 are 99.57 pct identical to residues 1 to 1174 of 1174 from Escherichia coli K-12 Strain MG1655: B1378.
     
 0.767
adhE
CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; This enzyme has three activities: ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent reaction (By similarity); In the N-terminal section; belongs to the aldehyde dehydrogenase family.
 
  
 0.708
ymdB
Putative polyprotein; Deacetylates O-acetyl-ADP ribose to yield ADP-ribose and free acetate. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization/activation; Belongs to the YmdB family.
      
 0.555
mhpF
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
      
 0.463
Z1046
Hypothetical protein; Residues 1 to 178 of 184 are 100.00 pct identical to residues 1 to 178 of 810 from Escherichia coli K-12 Strain MG1655: B0823.
 
  
 0.444
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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