STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureA_2Putative urease structural subunit A (gamma); Residues 1 to 100 of 100 are 95.99 pct identical to residues 1 to 100 of 100 from GenPept 118 : gi|149336|gb|AAA25149.1| (M36068) urease subunit A [Klebsiella aerogenes]. (100 aa)    
Predicted Functional Partners:
ureB_2
Putative urease structural subunit B (beta); Residues 1 to 106 of 106 are 82.07 pct identical to residues 1 to 106 of 106 from GenPept 118 : gi|149337|gb|AAA25150.1| (M36068) urease subunit B [Klebsiella aerogenes].
 
 0.998
ureC_2
Putative urease structural subunit C (alpha); Residues 2 to 568 of 568 are 90.82 pct identical to residues 1 to 567 of 567 from GenPept 118 : gi|149338|gb|AAA25151.1| (M36068) urease subunit C [Klebsiella aerogenes].
 
 0.998
ureB
Putative urease structural subunit B (beta); Residues 1 to 106 of 106 are 82.07 pct identical to residues 1 to 106 of 106 from GenPept 118 : gi|149337|gb|AAA25150.1| (M36068) urease subunit B [Klebsiella aerogenes]; Belongs to the urease beta subunit family.
 
 0.995
ureC
Putative urease structural subunit C (alpha); Residues 2 to 568 of 568 are 90.82 pct identical to residues 1 to 567 of 567 from GenPept 118 : gi|149338|gb|AAA25151.1| (M36068) urease subunit C [Klebsiella aerogenes]; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
 0.992
ureG_2
Putative urease accessory protein G; Residues 1 to 205 of 205 are 90.24 pct identical to residues 1 to 205 of 205 from GenPept 118 : gi|149341|gb|AAA25154.1| (M36068) urease accessory protein G [Klebsiella aerogenes].
 
  
 0.969
ureF_2
Putative urease accessory protein F; Residues 1 to 224 of 224 are 79.46 pct identical to residues 1 to 224 of 224 from GenPept 118 : gi|149340|gb|AAA25153.1| (M36068) urease accessory protein F [Klebsiella aerogenes].
 
 
 0.965
ureE_2
Putative urease accessory protein E; Residues 1 to 154 of 154 are 80.51 pct identical to residues 1 to 154 of 158 from GenPept 118 : gi|149339|gb|AAA25152.1| (M36068) urease accessory protein E [Klebsiella aerogenes].
 
  
 0.937
ureD_2
Putative urease accessory protein D; Residues 2 to 232 of 232 are 71.86 pct identical to residues 13 to 243 of 270 from GenPept 118 : gi|149334|gb|AAA25148.1| (M55391) urease [Klebsiella aerogenes].
 
 
 0.928
ureG
Putative urease accessory protein G; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.889
ureF
Putative urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.863
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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