Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alaA | alr | Z3551 | Z5651 | Putative aminotransferase; Residues 1 to 405 of 405 are 99.75 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2290. | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | 0.817 |
| alaA | dadX | Z3551 | Z1953 | Putative aminotransferase; Residues 1 to 405 of 405 are 99.75 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2290. | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | 0.817 |
| alr | alaA | Z5651 | Z3551 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Putative aminotransferase; Residues 1 to 405 of 405 are 99.75 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2290. | 0.817 |
| alr | dadA | Z5651 | Z1952 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | 0.931 |
| alr | dadX | Z5651 | Z1953 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | 0.916 |
| alr | ddlA | Z5651 | Z0477 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Hypothetical protein; Cell wall formation. | 0.970 |
| alr | ddlB | Z5651 | Z0102 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | D-alanine-D-alanine ligase B, affects cell division; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.970 |
| alr | lgt | Z5651 | Z4145 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.530 |
| alr | murF | Z5651 | Z0096 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | D-alanine:D-alanine-adding enzyme; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.957 |
| alr | putA | Z5651 | Z1513 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Proline dehydrogenase, P5C dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.576 |
| alr | rhsC | Z5651 | Z0847 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | rhsC protein in rhs element, interrupted; Residues 1 to 1397 of 1397 are 97.78 pct identical to residues 1 to 1397 of 1397 from Escherichia coli K-12 Strain MG1655: B0700. | 0.743 |
| alr | ybeN | Z5651 | Z0786 | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | Orf, hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.602 |
| dadA | alr | Z1952 | Z5651 | D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | 0.931 |
| dadA | dadX | Z1952 | Z1953 | D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | 0.999 |
| dadX | alaA | Z1953 | Z3551 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | Putative aminotransferase; Residues 1 to 405 of 405 are 99.75 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2290. | 0.817 |
| dadX | alr | Z1953 | Z5651 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | Alanine racemase 1; Catalyzes the interconversion of L-alanine and D-alanine. Provides the D-alanine required for cell wall biosynthesis (By similarity). | 0.916 |
| dadX | dadA | Z1953 | Z1952 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | 0.999 |
| dadX | ddlA | Z1953 | Z0477 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | Hypothetical protein; Cell wall formation. | 0.956 |
| dadX | ddlB | Z1953 | Z0102 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | D-alanine-D-alanine ligase B, affects cell division; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.944 |
| dadX | lgt | Z1953 | Z4145 | Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA. | Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.540 |
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