node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Z5899 | ftsJ | Z5899 | Z4541 | Putative ATP-dependent helicase; Residues 39 to 635 of 952 are 26.61 pct identical to residues 22 to 665 of 979 from GenPept 118 : gi|2822377|gb|AAC82883.1| (AF016485) ORF H1186 [Halobacterium sp. NRC-1]. | Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.686 |
Z5899 | yebU | Z5899 | Z2882 | Putative ATP-dependent helicase; Residues 39 to 635 of 952 are 26.61 pct identical to residues 22 to 665 of 979 from GenPept 118 : gi|2822377|gb|AAC82883.1| (AF016485) ORF H1186 [Halobacterium sp. NRC-1]. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.687 |
arnA | yebU | Z3513 | Z2882 | Putative transformylase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.670 |
csrA | yebU | Z3998 | Z2882 | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.702 |
ftsJ | Z5899 | Z4541 | Z5899 | Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Putative ATP-dependent helicase; Residues 39 to 635 of 952 are 26.61 pct identical to residues 22 to 665 of 979 from GenPept 118 : gi|2822377|gb|AAC82883.1| (AF016485) ORF H1186 [Halobacterium sp. NRC-1]. | 0.686 |
ftsJ | yebU | Z4541 | Z2882 | Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.733 |
rlmI | yebU | Z1319 | Z2882 | Putative oxidoreductase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.850 |
yajK | yebU | Z0526 | Z2882 | Putative oxidoreductase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. Belongs to the ThiI family. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.708 |
yajK | yfgB | Z0526 | Z3780 | Putative oxidoreductase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. Belongs to the ThiI family. | Orf, hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.436 |
yebS | yebU | Z2880 | Z2882 | Orf, hypothetical protein; Component of a transport pathway that contributes to membrane integrity. | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.688 |
yebU | Z5899 | Z2882 | Z5899 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Putative ATP-dependent helicase; Residues 39 to 635 of 952 are 26.61 pct identical to residues 22 to 665 of 979 from GenPept 118 : gi|2822377|gb|AAC82883.1| (AF016485) ORF H1186 [Halobacterium sp. NRC-1]. | 0.687 |
yebU | arnA | Z2882 | Z3513 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Putative transformylase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | 0.670 |
yebU | csrA | Z2882 | Z3998 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.702 |
yebU | ftsJ | Z2882 | Z4541 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.733 |
yebU | rlmI | Z2882 | Z1319 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Putative oxidoreductase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA. | 0.850 |
yebU | yajK | Z2882 | Z0526 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Putative oxidoreductase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. Belongs to the ThiI family. | 0.708 |
yebU | yebS | Z2882 | Z2880 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Orf, hypothetical protein; Component of a transport pathway that contributes to membrane integrity. | 0.688 |
yebU | yfgB | Z2882 | Z3780 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Orf, hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.706 |
yebU | yggJ | Z2882 | Z4291 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Orf, hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.804 |
yebU | yraL | Z2882 | Z4505 | Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | Orf, hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.684 |