Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| htrA | lamB | Z0173 | Z5634 | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | 0.564 |
| htrA | ompA | Z0173 | Z1307 | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.921 |
| htrA | ompC | Z0173 | Z3473 | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | Outer membrane protein 1b (Ib;c); Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.983 |
| htrA | ompF | Z0173 | Z1276 | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | Outer membrane protein 1a (Ia;b;F); Residues 1 to 362 of 362 are 99.44 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 Strain MG1655: B0929; Belongs to the Gram-negative porin family. | 0.870 |
| htrA | ompX | Z0173 | Z1036 | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | Outer membrane protein X; Residues 1 to 171 of 171 are 100.00 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 Strain MG1655: B0814. | 0.494 |
| lamB | htrA | Z5634 | Z0173 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | 0.564 |
| lamB | ompA | Z5634 | Z1307 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.912 |
| lamB | ompC | Z5634 | Z3473 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane protein 1b (Ib;c); Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.946 |
| lamB | ompF | Z5634 | Z1276 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane protein 1a (Ia;b;F); Residues 1 to 362 of 362 are 99.44 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 Strain MG1655: B0929; Belongs to the Gram-negative porin family. | 0.940 |
| lamB | ompX | Z5634 | Z1036 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane protein X; Residues 1 to 171 of 171 are 100.00 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 Strain MG1655: B0814. | 0.614 |
| lamB | phoE | Z5634 | Z0302 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane pore protein E (E,Ic,NmpAB); Residues 1 to 351 of 351 are 99.71 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 Strain MG1655: B0241; Belongs to the Gram-negative porin family. | 0.894 |
| lamB | tolB | Z5634 | Z0908 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Periplasmic protein involved in the tonb-independent uptake of group A colicins; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occupies a key intermediary position in the Tol-Pal system because it communicates directly with both membrane-embedded components, Pal in the outer membrane and TolA in the inner membrane. | 0.581 |
| lamB | tolC | Z5634 | Z4392 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Outer membrane channel; Residues 1 to 495 of 495 are 99.79 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 Strain MG1655: B3035. | 0.521 |
| lamB | tsx | Z5634 | Z0512 | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | Nucleoside channel; Functions as substrate-specific channel for nucleosides and deoxynucleosides; Belongs to the nucleoside-specific channel-forming outer membrane porin (Tsx) (TC 1.B.10) family. | 0.758 |
| ompA | htrA | Z1307 | Z0173 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Periplasmic serine protease Do; DegP acts as a chaperone at low temperatures but switches to a peptidase (heat shock protein) at higher temperatures. It degrades transiently denatured and unfolded proteins which accumulate in the periplasm following heat shock or other stress conditions. DegP is efficient with Val-Xaa and Ile-Xaa peptide bonds, suggesting a preference for beta-branched side chain amino acids. Only unfolded proteins devoid of disulfide bonds appear capable of being cleaved, thereby preventing non-specific proteolysis of folded proteins. Its proteolytic activity is essen [...] | 0.921 |
| ompA | lamB | Z1307 | Z5634 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Phage lambda receptor protein; Involved in the transport of maltose and maltodextrins, indispensable for translocation of dextrins containing more than three glucosyl moieties. A hydrophobic path ('greasy slide') of aromatic residues serves to guide and select the sugars for transport through the channel (By similarity); Belongs to the porin LamB (TC 1.B.3) family. | 0.912 |
| ompA | ompC | Z1307 | Z3473 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein 1b (Ib;c); Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.995 |
| ompA | ompF | Z1307 | Z1276 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein 1a (Ia;b;F); Residues 1 to 362 of 362 are 99.44 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 Strain MG1655: B0929; Belongs to the Gram-negative porin family. | 0.987 |
| ompA | ompX | Z1307 | Z1036 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane protein X; Residues 1 to 171 of 171 are 100.00 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 Strain MG1655: B0814. | 0.871 |
| ompA | phoE | Z1307 | Z0302 | Outer membrane protein 3a (II*;G;d); With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Outer membrane pore protein E (E,Ic,NmpAB); Residues 1 to 351 of 351 are 99.71 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 Strain MG1655: B0241; Belongs to the Gram-negative porin family. | 0.901 |
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