STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
talATransaldolase A; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa)    
Predicted Functional Partners:
tktB
Transketolase 2 isozyme; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
 0.999
tktA
Transketolase 1 isozyme; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
 0.995
fbaB
Orf, hypothetical protein; Residues 1 to 374 of 374 are 100.00 pct identical to residues 1 to 374 of 374 from Escherichia coli K-12 Strain MG1655: B2097.
  
 
 0.963
pgi
Glucosephosphate isomerase; Residues 1 to 549 of 549 are 100.00 pct identical to residues 1 to 549 of 549 from Escherichia coli K-12 Strain MG1655: B4025; Belongs to the GPI family.
  
 
 0.963
fba
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
  
 
 0.930
ydbK
Putative oxidoreductase, Fe-S subunit; Residues 1 to 1174 of 1174 are 99.57 pct identical to residues 1 to 1174 of 1174 from Escherichia coli K-12 Strain MG1655: B1378.
  
 
 0.926
pfkB
6-phosphofructokinase II; Residues 1 to 309 of 309 are 99.35 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 Strain MG1655: B1723; Belongs to the carbohydrate kinase PfkB family.
   
 
 0.926
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.923
Z5687
Putative aldolase; Residues 1 to 286 of 286 are 41.86 pct identical to residues 1 to 285 of 285 from GenPept 118 : gi|2636249|emb|CAB15740.1| (Z99123) fructose-1,6-bisphosphate aldolase [Bacillus subtilis].
  
 
 0.921
fbp
Fructose-bisphosphatase; Residues 1 to 332 of 332 are 99.39 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 Strain MG1655: B4232.
  
 
 0.917
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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