STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
perMPutative permease; Residues 1 to 353 of 353 are 100.00 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 Strain MG1655: B2493. (353 aa)    
Predicted Functional Partners:
Z1886
Putative capsid protein of prophage CP-933X; Residues 1 to 439 of 439 are 97.94 pct identical to residues 1 to 439 of 439 from GenPept 118 : gi|215109|gb|AAA96537.1| (J02459) C (capsid component;439) [bacteriophage lambda].
     
 0.704
ydcT
Putative ATP-binding component of a transport system; Residues 1 to 337 of 337 are 99.40 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 Strain MG1655: B1441; Belongs to the ABC transporter superfamily.
   
  
 0.594
bepA
Orf, hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.528
yjcQ
Putative enzyme; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride.
      
 0.499
yfgD
Putative oxidoreductase; Residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 Strain MG1655: B2495.
       0.486
focA
Probable formate transporter (formate channel 1); Involved in the bidirectional transport of formate.
      
 0.463
tesA
acyl-CoA thioesterase I; Residues 1 to 208 of 208 are 99.51 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 Strain MG1655: B0494.
 
     0.401
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.