STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (591 aa)    
Predicted Functional Partners:
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
 
 
 0.996
fucU
Protein of fucose operon; Involved in the anomeric conversion of L-fucose.
 
  
 0.946
yajF
Hypothetical protein; Residues 1 to 348 of 348 are 99.42 pct identical to residues 1 to 348 of 348 from Escherichia coli K-12 Strain MG1655: B0394.
    
 0.811
fucP
Fucose permease; Residues 1 to 438 of 438 are 99.77 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 Strain MG1655: B2801.
  
  
 0.805
Z3624
D-fructokinase; Residues 1 to 292 of 305 are 91.12 pct identical to residues 1 to 291 of 305 from GenPept 118 : gi|608707|emb|CAA57218.1| (X81461) D-fructokinase [Escherichia coli]; Belongs to the carbohydrate kinase PfkB family.
    
  0.802
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate.
 
  
 0.780
fucK-2
Putative xylulose kinase; Residues 4 to 499 of 502 are 23.34 pct identical to residues 2 to 501 of 501 from GenPept 118 : gi|149607|gb|AAA25259.1| (M57384) D-xylulose kinase [Lactobacillus pentosus].
  
  
 0.749
rhaA
L-rhamnose isomerase; Residues 1 to 419 of 419 are 98.56 pct identical to residues 1 to 419 of 419 from Escherichia coli K-12 Strain MG1655: B3903.
  
   
 0.725
ugpA
Sn-glycerol 3-phosphate transport system, integral membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.710
fucA
L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
  
 0.705
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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