STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylHPutative xylose transport, membrane component; Part of the binding-protein-dependent transport system for D- xylose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. AraH/RbsC subfamily. (393 aa)    
Predicted Functional Partners:
xylG
Putative ATP-binding protein of xylose transport system; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.999
xylF
Xylose binding protein transport system; Residues 1 to 330 of 330 are 99.39 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 Strain MG1655: B3566.
 
 0.998
xylR
Putative regulator of xyl operon; Regulatory protein for the xylBAFGHR operon.
 
   
 0.837
rbsA2
Putative ATP-binding protein of ribose ABC transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.778
araG
ATP-binding component of high-affinity L-arabinose transport system; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
  
 0.774
rbsA
ATP-binding component of D-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.772
ytfR
Putative ATP-binding component of ABC transporter; Part of the ABC transporter complex YtfQRT-YjfF involved in galactofuranose transport. Responsible for energy coupling to the transport system.
  
 0.764
xylA
D-xylose isomerase; Residues 1 to 440 of 440 are 99.54 pct identical to residues 1 to 440 of 440 from Escherichia coli K-12 Strain MG1655: B3565; Belongs to the xylose isomerase family.
 
  
 0.759
yphE
Putative ATP-binding component of a transport system; Residues 1 to 503 of 503 are 99.00 pct identical to residues 1 to 503 of 503 from Escherichia coli K-12 Strain MG1655: B2547.
  
 0.747
Z5689
Putative periplasmic ribose-binding protein of ABC transport system; Residues 6 to 309 of 313 are 35.04 pct identical to residues 348 to 651 of 651 from GenPept 118 : gi|6714794|emb|CAB66286.1| (AL136519) bifunctional carbohydrate binding and transport protein. [Streptomyces coelicolor A3(2)].
  
 0.742
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.