STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysESerine acetyltransferase; Residues 1 to 273 of 273 are 100.00 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 Strain MG1655: B3607; Belongs to the transferase hexapeptide repeat family. (273 aa)    
Predicted Functional Partners:
cysK
Cysteine synthase A, O-acetylserine sulfhydrolase A; Residues 1 to 323 of 323 are 100.00 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 Strain MG1655: B2414; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.999
cysM
Cysteine synthase B, O-acetylserine sulfhydrolase B; Residues 1 to 303 of 303 are 98.34 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 Strain MG1655: B2421; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.993
sdaA
L-serine deaminase; Residues 1 to 454 of 454 are 99.77 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 Strain MG1655: B1814; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.903
sdaB
L-serine dehydratase (deaminase), L-SD2; Residues 1 to 455 of 455 are 99.56 pct identical to residues 1 to 455 of 455 from Escherichia coli K-12 Strain MG1655: B2797; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.903
tdcG_3
Putative L-serine deaminase; Residues 3 to 455 of 456 are 73.28 pct identical to residues 1 to 453 of 454 from Escherichia coli K-12 Strain MG1655: B1814; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.903
cysS
Cysteine tRNA synthetase; Residues 1 to 461 of 461 are 99.56 pct identical to residues 1 to 461 of 461 from Escherichia coli K-12 Strain MG1655: B0526; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.897
trpB
Tryptophan synthase, beta protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.863
thrA
Aspartokinase I, homoserine dehydrogenase I; Residues 1 to 820 of 820 are 99.75 pct identical to residues 1 to 820 of 820 from Escherichia coli K-12 Strain MG1655: B0002; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
  
 0.852
metL
Aspartokinase II and homoserine dehydrogenase II; Residues 1 to 810 of 810 are 99.87 pct identical to residues 1 to 810 of 810 from Escherichia coli K-12 Strain MG1655: B3940; In the C-terminal section; belongs to the homoserine dehydrogenase family.
    
 0.833
pssA
Phosphatidylserine synthase; Residues 1 to 452 of 452 are 100.00 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 Strain MG1655: B2585.
  
  
  0.823
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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