Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| recA | recF | Z4002 | Z5191 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | 0.899 |
| recA | recG | Z4002 | Z5078 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | 0.877 |
| recA | recJ | Z4002 | Z4230 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ssDNA exonuclease, 5' --> 3' specific; Residues 1 to 577 of 577 are 99.65 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 Strain MG1655: B2892. | 0.832 |
| recA | recQ | Z4002 | Z5343 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ATP-dependent DNA helicase; Residues 1 to 611 of 611 are 99.67 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 Strain MG1655: B3822. | 0.938 |
| recA | ruvA | Z4002 | Z2913 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Holliday junction helicase subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.923 |
| recA | ruvB | Z4002 | Z2912 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Holliday junction helicase subunit A; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.891 |
| recA | ruvC | Z4002 | Z2915 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Holliday junction nuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group (By similarity). | 0.872 |
| recA | uvrD | Z4002 | Z5330 | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA-dependent ATPase I and helicase II; Residues 1 to 720 of 720 are 99.86 pct identical to residues 1 to 720 of 720 from Escherichia coli K-12 Strain MG1655: B3813. | 0.944 |
| recF | recA | Z5191 | Z4002 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.899 |
| recF | recG | Z5191 | Z5078 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | 0.919 |
| recF | recJ | Z5191 | Z4230 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | ssDNA exonuclease, 5' --> 3' specific; Residues 1 to 577 of 577 are 99.65 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 Strain MG1655: B2892. | 0.891 |
| recF | recQ | Z5191 | Z5343 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | ATP-dependent DNA helicase; Residues 1 to 611 of 611 are 99.67 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 Strain MG1655: B3822. | 0.816 |
| recF | ruvA | Z5191 | Z2913 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | Holliday junction helicase subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.895 |
| recF | ruvB | Z5191 | Z2912 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | Holliday junction helicase subunit A; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.696 |
| recF | ruvC | Z5191 | Z2915 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | Holliday junction nuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group (By similarity). | 0.861 |
| recF | uvrD | Z5191 | Z5330 | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | DNA-dependent ATPase I and helicase II; Residues 1 to 720 of 720 are 99.86 pct identical to residues 1 to 720 of 720 from Escherichia coli K-12 Strain MG1655: B3813. | 0.863 |
| recG | recA | Z5078 | Z4002 | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.877 |
| recG | recF | Z5078 | Z5191 | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | ssDNA and dsDNA binding, ATP binding; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | 0.919 |
| recG | recJ | Z5078 | Z4230 | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | ssDNA exonuclease, 5' --> 3' specific; Residues 1 to 577 of 577 are 99.65 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 Strain MG1655: B2892. | 0.877 |
| recG | recQ | Z5078 | Z5343 | DNA helicase, resolution of Holliday junctions, branch migration; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA). Has a role in constitutive stable DNA replication (CsdR) and R- loop formation (By similarity); Belongs to the helicase family. RecG subfamily. | ATP-dependent DNA helicase; Residues 1 to 611 of 611 are 99.67 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 Strain MG1655: B3822. | 0.905 |
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