STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
escCescC; Residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from GenPept 118 : gi|3414909|gb|AAC31520.1| (AF071034) L0041 [Escherichia coli]. (512 aa)    
Predicted Functional Partners:
escJ
escJ; Residues 1 to 190 of 190 are 100.00 pct identical to residues 1 to 190 of 190 from GenPept 118 : gi|2865286|gb|AAC38379.1| (AF022236) EscJ [Escherichia coli].
 
 0.995
cesD
cesD; Residues 1 to 151 of 151 are 100.00 pct identical to residues 1 to 151 of 151 from GenPept 118 : gi|2865283|gb|AAC38376.1| (AF022236) CesD [Escherichia coli].
 
  
 0.954
escN
escN; Residues 1 to 446 of 446 are 100.00 pct identical to residues 1 to 446 of 446 from GenPept 118 : gi|3414902|gb|AAC31513.1| (AF071034) L0034 [Escherichia coli].
 
 
 0.951
escT
escT; Residues 1 to 258 of 258 are 100.00 pct identical to residues 1 to 258 of 258 from GenPept 118 : gi|3414915|gb|AAC31526.1| (AF071034) L0047 [Escherichia coli].
 
 
 0.926
eprK
Putative lipoprotein of type III secretion apparatus; Residues 2 to 232 of 244 are 53.87 pct identical to residues 4 to 231 of 252 from GenPept 118 : gi|717103|gb|AAB60191.1| (U21676) PrgK protein [Salmonella typhimurium].
 
 
 0.916
epaQ
Type III secretion apparatus protein; Residues 1 to 86 of 86 are 68.60 pct identical to residues 1 to 86 of 86 from GenPept 118 : gi|973263|gb|AAC43967.1| (U29346) SpaQ [Salmonella senftenberg].
 
 
 0.907
escS
escS; Residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from GenPept 118 : gi|2865277|gb|AAC38370.1| (AF022236) EscS [Escherichia coli].
 
 
 0.900
epaR1
Type III secretion apparatus protein; Residues 5 to 150 of 150 are 44.52 pct identical to residues 5 to 150 of 263 from GenPept 118 : gi|404292|emb|CAA51926.1| (X73525) surface presentation of antigens [Salmonella typhimurium].
 
 
 0.897
escV
escV; Residues 1 to 675 of 675 are 100.00 pct identical to residues 1 to 675 of 675 from GenPept 118 : gi|3414903|gb|AAC31514.1| (AF071034) L0035 [Escherichia coli].
 
 
 0.897
escR-2
Putative integral membrane protein-component of typeIII secretion apparatus; Residues 1 to 218 of 221 are 69.05 pct identical to residues 1 to 223 of 224 from GenPept 118 : gi|975759|gb|AAC43849.1| (U29360) SpaP [Salmonella enterica].
 
 
 0.893
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.