Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aceA | aceB | Z5601 | Z5600 | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | 0.999 |
| aceA | aceK | Z5601 | Z5602 | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | 0.983 |
| aceA | icdA | Z5601 | Z1865 | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | Isocitrate dehydrogenase, specific for NADP+; Residues 1 to 416 of 416 are 99.27 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B1136. | 0.819 |
| aceA | iclR | Z5601 | Z5609 | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | Repressor of aceBA operon; Residues 1 to 287 of 287 are 100.00 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 Strain MG1655: B4018. | 0.801 |
| aceA | ycdW | Z5601 | Z1666 | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | Putative dehydrogenase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. | 0.946 |
| aceB | aceA | Z5600 | Z5601 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | 0.999 |
| aceB | aceK | Z5600 | Z5602 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | 0.945 |
| aceB | icdA | Z5600 | Z1865 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Isocitrate dehydrogenase, specific for NADP+; Residues 1 to 416 of 416 are 99.27 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B1136. | 0.783 |
| aceB | iclR | Z5600 | Z5609 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Repressor of aceBA operon; Residues 1 to 287 of 287 are 100.00 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 Strain MG1655: B4018. | 0.655 |
| aceB | ycdW | Z5600 | Z1666 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Putative dehydrogenase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. | 0.927 |
| aceB | yojH | Z5600 | Z3468 | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | Orf, hypothetical protein; Residues 1 to 548 of 548 are 99.63 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 Strain MG1655: B2210. | 0.914 |
| aceK | aceA | Z5602 | Z5601 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Isocitrate lyase; Residues 6 to 439 of 439 are 99.53 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 Strain MG1655: B4015. | 0.983 |
| aceK | aceB | Z5602 | Z5600 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Malate synthase A; Residues 1 to 533 of 533 are 99.62 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B4014; Belongs to the malate synthase family. | 0.945 |
| aceK | gatD | Z5602 | Z3254 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Galactitol-1-phosphate dehydrogenase; Converts galactitol 1-phosphate to tagatose 6-phosphate. | 0.554 |
| aceK | icdA | Z5602 | Z1865 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Isocitrate dehydrogenase, specific for NADP+; Residues 1 to 416 of 416 are 99.27 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B1136. | 0.988 |
| aceK | iclR | Z5602 | Z5609 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Repressor of aceBA operon; Residues 1 to 287 of 287 are 100.00 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 Strain MG1655: B4018. | 0.624 |
| aceK | lepA | Z5602 | Z3851 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | GTP-binding elongation factor, may be inner membrane protein; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.463 |
| aceK | putA | Z5602 | Z1513 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Proline dehydrogenase, P5C dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.430 |
| aceK | ycdW | Z5602 | Z1666 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Putative dehydrogenase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. | 0.463 |
| aceK | yceJ | Z5602 | Z1693 | Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. | Putative cytochrome; Residues 1 to 188 of 188 are 99.46 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 Strain MG1655: B1057. | 0.529 |
page 1 of 2