Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Z4182 | gntP | Z4182 | Z5919 | Hypothetical protein; Residues 2 to 259 of 262 are 29.06 pct identical to residues 124 to 380 of 392 from GenPept 118 : gi|717100|gb|AAB60188.1| (U21676) PrgH protein [Salmonella typhimurium]. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.721 |
| Z4182 | yciI | Z4182 | Z2029 | Hypothetical protein; Residues 2 to 259 of 262 are 29.06 pct identical to residues 124 to 380 of 392 from GenPept 118 : gi|717100|gb|AAB60188.1| (U21676) PrgH protein [Salmonella typhimurium]. | Orf, hypothetical protein; Residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1251. | 0.721 |
| codA | gntP | Z0433 | Z5919 | Cytosine deaminase; Residues 1 to 427 of 427 are 99.06 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 Strain MG1655: B0337. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.483 |
| codA | yadN | Z0433 | Z0152 | Cytosine deaminase; Residues 1 to 427 of 427 are 99.06 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 Strain MG1655: B0337. | Putative fimbrial protein; Residues 7 to 201 of 201 are 39.50 pct identical to residues 8 to 194 of 194 from Escherichia coli K-12 Strain MG1655: B0141. | 0.480 |
| dsdX | gntP | Z3627 | Z5919 | D-serine permease; Residues 1 to 72 of 72 are 100.00 pct identical to residues 374 to 445 of 445 from GenPept 118 : gi|1788707|gb|AAC75424.1| (AE000324) transport system permease (serine?) [Escherichia coli]. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.543 |
| gntK | gntP | Z4805 | Z5919 | Gluconokinase 2, thermoresistant; Residues 1 to 162 of 162 are 100.00 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 Strain MG1655: B3437. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.582 |
| gntP | Z4182 | Z5919 | Z4182 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Hypothetical protein; Residues 2 to 259 of 262 are 29.06 pct identical to residues 124 to 380 of 392 from GenPept 118 : gi|717100|gb|AAB60188.1| (U21676) PrgH protein [Salmonella typhimurium]. | 0.721 |
| gntP | codA | Z5919 | Z0433 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Cytosine deaminase; Residues 1 to 427 of 427 are 99.06 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 Strain MG1655: B0337. | 0.483 |
| gntP | dsdX | Z5919 | Z3627 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | D-serine permease; Residues 1 to 72 of 72 are 100.00 pct identical to residues 374 to 445 of 445 from GenPept 118 : gi|1788707|gb|AAC75424.1| (AE000324) transport system permease (serine?) [Escherichia coli]. | 0.543 |
| gntP | gntK | Z5919 | Z4805 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Gluconokinase 2, thermoresistant; Residues 1 to 162 of 162 are 100.00 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 Strain MG1655: B3437. | 0.582 |
| gntP | mdoB | Z5919 | Z5959 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Phosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family. | 0.702 |
| gntP | srlD | Z5919 | Z4012 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Glucitol (sorbitol)-6-phosphate dehydrogenase; Residues 1 to 259 of 259 are 98.84 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 Strain MG1655: B2705; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.472 |
| gntP | uxuA | Z5919 | Z5920 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Mannonate hydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. | 0.468 |
| gntP | yadI | Z5919 | Z0140 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Putative PTS enzyme II B component; Residues 1 to 146 of 146 are 98.63 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 Strain MG1655: B0129. | 0.463 |
| gntP | yadN | Z5919 | Z0152 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Putative fimbrial protein; Residues 7 to 201 of 201 are 39.50 pct identical to residues 8 to 194 of 194 from Escherichia coli K-12 Strain MG1655: B0141. | 0.485 |
| gntP | yciI | Z5919 | Z2029 | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | Orf, hypothetical protein; Residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1251. | 0.721 |
| mdoB | gntP | Z5959 | Z5919 | Phosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.702 |
| srlD | gntP | Z4012 | Z5919 | Glucitol (sorbitol)-6-phosphate dehydrogenase; Residues 1 to 259 of 259 are 98.84 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 Strain MG1655: B2705; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.472 |
| srlD | yadI | Z4012 | Z0140 | Glucitol (sorbitol)-6-phosphate dehydrogenase; Residues 1 to 259 of 259 are 98.84 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 Strain MG1655: B2705; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative PTS enzyme II B component; Residues 1 to 146 of 146 are 98.63 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 Strain MG1655: B0129. | 0.786 |
| uxuA | gntP | Z5920 | Z5919 | Mannonate hydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. | Gluconate transport system permease 3; High-affinity gluconate transporter with fairly broad specificity, including low affinity for glucuronate, several disaccharides, and some hexoses, but not glucose. | 0.468 |
page 1 of 2