STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES48715.1GlcNAc-PI de-N-acetylase. (683 aa)    
Predicted Functional Partners:
SER39923.1
DNA-binding transcriptional activator of the SARP family.
  
     0.674
SER39803.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
  
    0.659
SER39786.1
TIR domain-containing protein.
  
     0.633
SER01865.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.596
SEQ99446.1
Hypothetical protein.
  
     0.593
SER92675.1
Putative ATP-dependent endonuclease of the OLD family.
  
     0.593
SES21734.1
Polyvinyl alcohol dehydrogenase (cytochrome).
  
     0.588
SES31530.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.576
SER39903.1
Helix-turn-helix domain-containing protein.
  
     0.537
SES47229.1
TENA/THI-4/PQQC family protein.
  
     0.536
Your Current Organism:
Actinokineospora terrae
NCBI taxonomy Id: 155974
Other names: A. terrae, DSM 44260, IFO 15668, JCM 9924, NBRC 15668, NRRL B-24049, strain YU6-3
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