rpmH protein (Desulfurella amilsii) - STRING interaction network

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Score

rpmH

LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpmB

0.993

rpsT

0.993

rpmF

0.992

rplU

0.992

OSS42349.1

0.992

rpsO

0.991

rpmI

0.991

rpsZ

0.991

rplM

0.991

rpsU

0.991

Your Current Organism:

Desulfurella amilsii

NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OSS42349.1	rplM	DESAMIL20_1902	DESAMIL20_1612	SSU ribosomal protein S16p.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
OSS42349.1	rplU	DESAMIL20_1902	DESAMIL20_1443	SSU ribosomal protein S16p.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
OSS42349.1	rpmB	DESAMIL20_1902	DESAMIL20_1395	SSU ribosomal protein S16p.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.997
OSS42349.1	rpmF	DESAMIL20_1902	DESAMIL20_118	SSU ribosomal protein S16p.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.998
OSS42349.1	rpmH	DESAMIL20_1902	DESAMIL20_1874	SSU ribosomal protein S16p.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.992
OSS42349.1	rpmI	DESAMIL20_1902	DESAMIL20_1484	SSU ribosomal protein S16p.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL35 family.	0.997
OSS42349.1	rpsO	DESAMIL20_1902	DESAMIL20_1299	SSU ribosomal protein S16p.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
OSS42349.1	rpsT	DESAMIL20_1902	DESAMIL20_2070	SSU ribosomal protein S16p.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.993
OSS42349.1	rpsU	DESAMIL20_1902	DESAMIL20_1643	SSU ribosomal protein S16p.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.993
OSS42349.1	rpsZ	DESAMIL20_1902	DESAMIL20_1563	SSU ribosomal protein S16p.	SSU ribosomal protein S14p (S29e) / SSU ribosomal protein S14p (S29e), zinc-dependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.999
rplM	OSS42349.1	DESAMIL20_1612	DESAMIL20_1902	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16p.	0.998
rplM	rplU	DESAMIL20_1612	DESAMIL20_1443	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplM	rpmB	DESAMIL20_1612	DESAMIL20_1395	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmF	DESAMIL20_1612	DESAMIL20_118	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplM	rpmH	DESAMIL20_1612	DESAMIL20_1874	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rplM	rpmI	DESAMIL20_1612	DESAMIL20_1484	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL35 family.	0.997
rplM	rpsO	DESAMIL20_1612	DESAMIL20_1299	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.998
rplM	rpsT	DESAMIL20_1612	DESAMIL20_2070	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.997
rplM	rpsU	DESAMIL20_1612	DESAMIL20_1643	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.995
rplM	rpsZ	DESAMIL20_1612	DESAMIL20_1563	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S14p (S29e) / SSU ribosomal protein S14p (S29e), zinc-dependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.998