STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS19276.1TRAP-type C4-dicarboxylate transport system, small permease component. (156 aa)    
Predicted Functional Partners:
EAS19277.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.994
EAS19275.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.990
EAS19274.1
Putative glycosyl hydrolase.
 
     0.811
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
       0.776
EAS19273.1
Gluconate 5-dehydrogenase.
    
  0.759
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.690
EAS19270.1
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.551
Your Current Organism:
Flavobacteria bacterium BBFL7
NCBI taxonomy Id: 156586
Other names: F. bacterium BBFL7, marine CFB-group bacterium BBFL7, marine bacterium BBFL7
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