STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB76417.1Barrel-sandwich domain of CusB or HlyD membrane-fusion. (423 aa)    
Predicted Functional Partners:
SFC79643.1
Macrolide transport system ATP-binding/permease protein.
  
 0.911
SFD01549.1
Macrolide transport system ATP-binding/permease protein.
  
 0.911
SFD98176.1
Macrolide transport system ATP-binding/permease protein.
  
 0.911
SFB73043.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
   
  0.796
SFB77929.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
   
  0.796
SFB78260.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
   
  0.796
SFB78772.1
Outer membrane protein TolC.
   
  0.796
SFB79168.1
Outer membrane efflux protein.
   
  0.796
SFC36776.1
Outer membrane protein, multidrug efflux system.
   
  0.796
SFC39475.1
Outer membrane protein.
   
  0.796
Your Current Organism:
Variovorax sp. NFACC26
NCBI taxonomy Id: 1566275
Other names: V. sp. NFACC26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.