node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplM | Mmc1_0837 | Mmc1_0246 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplA | rplS | Mmc1_0837 | Mmc1_0507 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
rplA | rplT | Mmc1_0837 | Mmc1_0366 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.996 |
rplA | rplU | Mmc1_0837 | Mmc1_3352 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.996 |
rplA | rpmA | Mmc1_0837 | Mmc1_3351 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L27; KEGG: nar:Saro_0930 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.993 |
rplA | rpmE | Mmc1_0837 | Mmc1_0136 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.991 |
rplA | rpmI | Mmc1_0837 | Mmc1_0365 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L35; KEGG: dps:DP1426 probable 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.995 |
rplA | rpsI | Mmc1_0837 | Mmc1_0247 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S9; KEGG: rsp:RSP_0021 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplA | rpsP | Mmc1_0837 | Mmc1_0504 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein S16; KEGG: aci:ACIAD3313 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rplA | trmD | Mmc1_0837 | Mmc1_0506 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.928 |
rplM | rplA | Mmc1_0246 | Mmc1_0837 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.998 |
rplM | rplS | Mmc1_0246 | Mmc1_0507 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
rplM | rplT | Mmc1_0246 | Mmc1_0366 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplM | rplU | Mmc1_0246 | Mmc1_3352 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.996 |
rplM | rpmA | Mmc1_0246 | Mmc1_3351 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L27; KEGG: nar:Saro_0930 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
rplM | rpmE | Mmc1_0246 | Mmc1_0136 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.992 |
rplM | rpmI | Mmc1_0246 | Mmc1_0365 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L35; KEGG: dps:DP1426 probable 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.996 |
rplM | rpsI | Mmc1_0246 | Mmc1_0247 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S9; KEGG: rsp:RSP_0021 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsP | Mmc1_0246 | Mmc1_0504 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S16; KEGG: aci:ACIAD3313 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplM | trmD | Mmc1_0246 | Mmc1_0506 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.893 |