STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2956PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pae:PA3346 probable two-component response regulator. (365 aa)    
Predicted Functional Partners:
Mmc1_2957
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pae:PA3347 hypothetical protein.
 
 0.992
Mmc1_2955
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: tbd:Tbd_1268 multi-sensor hybrid histidine kinase.
  
 
0.970
Mmc1_0440
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ppu:PP4364 anti-sigma F factor antagonist, putative.
 
 0.969
Mmc1_3533
KEGG: hch:HCH_05187 protein containing STAS (sulphate transporter and Anti-Sigma factor antagonist) domain.
 
 0.969
Mmc1_3579
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pae:PA3347 hypothetical protein.
 
 0.969
Mmc1_0411
Hypothetical protein; KEGG: psb:Psyr_3452 sulfate transporter/antisigma-factor antagonist STAS.
 
 0.968
Mmc1_0945
KEGG: ilo:IL1714 anti-anti-sigma regulatory factor.
 
 0.968
Mmc1_3069
KEGG: pae:PA3347 hypothetical protein.
 
 0.968
Mmc1_2953
KEGG: mca:MCA1204 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
0.963
Mmc1_3242
PAS/PAC sensor hybrid histidine kinase; KEGG: hch:HCH_00794 FOG: PAS/PAC domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.950
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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