node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rplI | Mmc1_0848 | Mmc1_2458 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.996 |
rplD | rplS | Mmc1_0848 | Mmc1_0507 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
rplD | rplT | Mmc1_0848 | Mmc1_0366 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.996 |
rplD | rplU | Mmc1_0848 | Mmc1_3352 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplD | rplV | Mmc1_0848 | Mmc1_0852 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
rplD | rplX | Mmc1_0848 | Mmc1_0858 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
rplD | rpmA | Mmc1_0848 | Mmc1_3351 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | PFAM: ribosomal protein L27; KEGG: nar:Saro_0930 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
rplD | rpmB | Mmc1_0848 | Mmc1_0815 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | PFAM: ribosomal protein L28; KEGG: sil:SPO0974 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.990 |
rplD | rpsI | Mmc1_0848 | Mmc1_0247 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | PFAM: ribosomal protein S9; KEGG: rsp:RSP_0021 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
rplD | rpsT | Mmc1_0848 | Mmc1_3424 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.981 |
rplI | rplD | Mmc1_2458 | Mmc1_0848 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.996 |
rplI | rplS | Mmc1_2458 | Mmc1_0507 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.995 |
rplI | rplT | Mmc1_2458 | Mmc1_0366 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplI | rplU | Mmc1_2458 | Mmc1_3352 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplI | rplV | Mmc1_2458 | Mmc1_0852 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.996 |
rplI | rplX | Mmc1_2458 | Mmc1_0858 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.992 |
rplI | rpmA | Mmc1_2458 | Mmc1_3351 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L27; KEGG: nar:Saro_0930 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
rplI | rpmB | Mmc1_2458 | Mmc1_0815 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L28; KEGG: sil:SPO0974 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.990 |
rplI | rpsI | Mmc1_2458 | Mmc1_0247 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein S9; KEGG: rsp:RSP_0021 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
rplI | rpsT | Mmc1_2458 | Mmc1_3424 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.977 |