STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ44298.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SHJ70228.1
Protein of unknown function.
 
 
 0.945
SHJ94000.1
Protein of unknown function.
 
 
 0.945
SHJ88927.1
Protein of unknown function.
 
 
 0.945
SHJ59464.1
Protein of unknown function.
 
 
 0.944
SHJ44374.1
Stage II sporulation protein E (SpoIIE).
 
    0.899
SHK80621.1
ABC-type multidrug transport system, ATPase component.
  
     0.773
SHK66388.1
ABC-type multidrug transport system, ATPase component.
  
     0.771
SHJ44321.1
Hypothetical protein.
       0.705
SHJ44349.1
His Kinase A (phospho-acceptor) domain-containing protein.
       0.596
SHK26586.1
Protein of unknown function.
  
     0.575
Your Current Organism:
Reichenbachiella agariperforans
NCBI taxonomy Id: 156994
Other names: DSM 26134, JCM 11238, KMM 3525, NBRC 16625, R. agariperforans, Reichenbachia agariperforans, Reichenbachia agariperforans Nedashkovskaya et al. 2003, Reichenbachiella agariperforans (Nedashkovskaya et al. 2003) Nedashkovskaya et al. 2005 emend. Cha et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.