STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002090115_00147Unannotated protein. (1084 aa)    
Predicted Functional Partners:
GCA_002090115_00148
Unannotated protein.
 
 
 0.992
GCA_002090115_01373
Unannotated protein.
  
 0.989
GCA_002090115_00144
Unannotated protein.
 
 
0.945
GCA_002090115_00205
Unannotated protein.
 
 
0.890
GCA_002090115_02194
Unannotated protein.
    
 0.788
GCA_002090115_00149
Unannotated protein.
 
     0.782
GCA_002090115_02856
Unannotated protein.
 
 
0.763
GCA_002090115_02281
Unannotated protein.
 
  
 0.749
GCA_002090115_00150
Unannotated protein.
 
     0.693
GCA_002090115_02837
Unannotated protein.
  
 
 0.626
Your Current Organism:
Demequina sp. NBRC110054
NCBI taxonomy Id: 1570343
Other names: D. sp. NBRC 110054, Demequina sp. NBRC 110054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.