STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002090115_01055Unannotated protein. (309 aa)    
Predicted Functional Partners:
GCA_002090115_01053
Unannotated protein.
 
 0.996
GCA_002090115_01054
Unannotated protein.
 
  0.995
GCA_002090115_00530
Unannotated protein.
 
 0.956
GCA_002090115_01031
Unannotated protein.
 
  0.949
GCA_002090115_00071
Unannotated protein.
 
 0.947
GCA_002090115_00524
Unannotated protein.
 
  0.939
GCA_002090115_00715
Unannotated protein.
 
 0.933
GCA_002090115_02394
Unannotated protein.
  
  0.933
GCA_002090115_03056
Unannotated protein.
 
 0.929
GCA_002090115_01308
Unannotated protein.
 
 0.926
Your Current Organism:
Demequina sp. NBRC110054
NCBI taxonomy Id: 1570343
Other names: D. sp. NBRC 110054, Demequina sp. NBRC 110054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.