STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002090115_01521Unannotated protein. (602 aa)    
Predicted Functional Partners:
GCA_002090115_01936
Unannotated protein.
    
 0.909
GCA_002090115_01519
Unannotated protein.
  
    0.877
GCA_002090115_02867
Unannotated protein.
   
 0.747
GCA_002090115_01520
Unannotated protein.
       0.740
GCA_002090115_01522
Unannotated protein.
  
    0.670
GCA_002090115_01518
Unannotated protein.
       0.646
GCA_002090115_02306
Unannotated protein.
    
 0.637
GCA_002090115_02900
Unannotated protein.
  
  
 0.533
GCA_002090115_02636
Unannotated protein.
  
  
  0.497
GCA_002090115_02899
Unannotated protein.
  
  
 0.493
Your Current Organism:
Demequina sp. NBRC110054
NCBI taxonomy Id: 1570343
Other names: D. sp. NBRC 110054, Demequina sp. NBRC 110054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.