STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN70986.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
AKN70987.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
AKN73090.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
AKN73944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.624
AKN70985.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.615
AKN70242.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
AKN73089.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
AKN74090.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
AKN72008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
AKN68599.1
Alanine-rich protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.595
AKN73153.1
Toxin-antitoxin system, toxin component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
Your Current Organism:
Streptomyces sp. PBH53
NCBI taxonomy Id: 1577075
Other names: S. sp. PBH53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.