STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKN73056.1Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)    
Predicted Functional Partners:
AKN73055.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.981
AKN73054.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.970
AKN71673.1
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.787
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.787
AKN73053.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
AKN75364.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
   
   0.691
AKN71588.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
   0.691
AKN73748.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
   
   0.691
rsmH
16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.654
AKN72683.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.604
Your Current Organism:
Streptomyces sp. PBH53
NCBI taxonomy Id: 1577075
Other names: S. sp. PBH53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.