STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12180.1HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; KEGG: cdl:CDR20291_1924 hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (257 aa)    
Predicted Functional Partners:
ADY12181.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: hau:Haur_2432 aldo/keto reductase.
  
    0.775
ADY12178.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_4816 binding-protein-dependent transport systems inner membrane component.
       0.741
ADY12179.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tle:Tlet_1115 binding-protein-dependent transport systems inner membrane component.
       0.741
ADY12177.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mrb:Mrub_0284 extracellular solute-binding protein family 1.
       0.559
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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