STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14157.1KEGG: cth:Cthe_2466 hypothetical protein. (251 aa)    
Predicted Functional Partners:
ADY14158.1
DnaB domain protein helicase domain protein; PFAM: DNA helicase, DnaB-like, C-terminal; KEGG: sta:STHERM_c13140 hypothetical protein.
  
  
 0.819
ADY14156.1
Hypothetical protein.
       0.732
ADY14153.1
TIGRFAM: Excisionase/Xis, DNA-binding.
       0.406
ADY14154.1
Regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR.
       0.406
ADY14155.1
Hypothetical protein.
       0.406
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.