STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_01062Serine palmitoyltransferase 2. (502 aa)    
Predicted Functional Partners:
Fcan01_20226
Phthiocerol synthesis polyketide synthase type I PpsC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.882
Fcan01_27949
Serine hydroxymethyltransferase, mitochondrial.
  
 
 0.837
Fcan01_20386
L-serine dehydratase/L-threonine deaminase.
   
 0.827
Fcan01_09427
Cystathionine beta-synthase.
    
 0.821
Fcan01_05006
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.821
Fcan01_05009
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.821
Fcan01_27192
Serine--pyruvate aminotransferase.
    
 0.817
Fcan01_14545
Serine--pyruvate aminotransferase.
    
 0.817
Fcan01_01291
Serine--pyruvate aminotransferase.
    
 0.817
Fcan01_06291
Phosphoserine phosphatase.
    
 0.816
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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