STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000000450annotation not available (139 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 0.953
fancm
FA complementation group M.
    
 0.904
birc6
Baculoviral IAP repeat containing 6.
   
 0.886
zfand4
Zinc finger AN1-type containing 4.
   
 0.859
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.851
bard1
BRCA1 associated RING domain 1.
    
 0.831
rps27a
Ribosomal protein S27a.
   
 0.822
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.808
rad18
RAD18 E3 ubiquitin protein ligase.
    
 0.776
LOC114855735
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 0.765
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.