STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gga2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (599 aa)    
Predicted Functional Partners:
LOC114868516
Rab5 GDP/GTP exchange factor-like.
    
 0.989
LOC114862273
Rab5 GDP/GTP exchange factor-like.
    
 0.989
LOC114869334
Rab5 GDP/GTP exchange factor-like.
    
 0.989
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.938
sorl1
Sortilin related receptor 1.
    
 
 0.917
igf2r
Insulin like growth factor 2 receptor.
    
 
 0.897
LOC114859390
ADP-ribosylation factor-binding protein GGA3-like.
  
0.890
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
  
0.887
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
  
  
 
0.823
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.816
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.