STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866967Endonuclease domain-containing 1 protein-like. (378 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.761
nxf1
Nuclear RNA export factor 1.
    
 0.744
LOC114865494
Protein S100-A1-like.
    
 0.738
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.700
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.695
arid4b
AT-rich interaction domain 4B.
    
 0.647
arid4a
AT-rich interaction domain 4A.
    
 0.647
maml1
Mastermind like transcriptional coactivator 1.
    
 0.631
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.592
MSL2
E3 ubiquitin-protein ligase MSL2-like.
    
 0.583
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.