STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860494Voltage-dependent calcium channel gamma-5 subunit-like. (275 aa)    
Predicted Functional Partners:
LOC114860516
Voltage-dependent calcium channel gamma-1 subunit-like.
     
0.963
cacng3
Calcium voltage-gated channel auxiliary subunit gamma 3.
  
 
0.936
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
   
 0.936
synj2bp
Synaptojanin 2 binding protein.
   
 0.923
GRIN3A
Glutamate receptor ionotropic, NMDA 3A-like.
     
 0.913
LOC114860657
Serine/threonine-protein phosphatase alpha-2 isoform-like.
   
 0.884
LOC114849913
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
   
 0.884
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
   
 0.884
ENSBSLP00000035266
Shisa family member 7a.
   
 
  0.884
ENSBSLP00000035572
annotation not available
   
 0.884
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.