STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl8Ribosomal protein L8. (257 aa)    
Predicted Functional Partners:
rps10
Ribosomal protein S10.
   
 0.999
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.999
rpl21
Ribosomal protein L21.
   
 0.999
rpl18a
Ribosomal protein L18a.
   
 0.999
ENSBSLP00000004541
Ribosomal protein S25.
   
 0.999
rpl35a
Ribosomal protein L35a.
   
 0.999
rps23
Ribosomal protein S23.
  
 0.999
rpl31
Ribosomal protein L31.
   
 0.999
rps18
Ribosomal protein S18.
  
 
 0.999
rps3a
Ribosomal protein S3A.
   
 0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.