STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS6HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (821 aa)    
Predicted Functional Partners:
hps5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
    
 0.982
hps3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
   
 0.982
bloc1s3
Biogenesis of lysosomal organelles complex 1 subunit 3.
     
 0.964
bloc1s6
Biogenesis of lysosomal organelles complex 1 subunit 6.
     
 0.964
LOC114865502
Biogenesis of lysosome-related organelles complex 1 subunit 4-like.
     
 0.963
dtnbp1
Dystrobrevin binding protein 1.
     
 0.962
hps1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.960
hps4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
     
 0.953
bloc1s5
Biogenesis of lysosomal organelles complex 1 subunit 5.
     
 0.952
bloc1s2
Biogenesis of lysosomal organelles complex 1 subunit 2.
     
 0.945
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.