STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tarbp2TARBP2 subunit of RISC loading complex. (345 aa)    
Predicted Functional Partners:
dicer1
Dicer 1, ribonuclease III.
    
 0.989
LOC114866221
Protein argonaute-4.
    
 0.977
drosha
Drosha ribonuclease III.
    
 0.961
dgcr8
DGCR8 microprocessor complex subunit.
    
 0.960
snd1
Staphylococcal nuclease and tudor domain containing 1.
     
 0.947
pop1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.944
ENSBSLP00000053027
annotation not available
    
  0.941
AGO3
Protein argonaute-3-like.
    
 0.938
LOC114842509
Protein argonaute-3.
    
 0.938
pop7
POP7 homolog, ribonuclease P/MRP subunit.
   
  0.931
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.