STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL40313.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
KIL39339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.982
KIL40194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.979
KIL40312.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.972
KIL39429.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.921
KIL39074.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.874
KIL40147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.863
KIL41912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.861
KIL42009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.857
KIL39045.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.841
KIL41453.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.831
Your Current Organism:
Paenibacillus sp. VKMB2647
NCBI taxonomy Id: 1590651
Other names: P. sp. VKM B-2647, Paenibacillus sp. B-2647, Paenibacillus sp. VKM B-2647
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.