Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Daro_1417 | Daro_2276 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.449 |
Daro_2258 | Daro_2260 | Heavy metal sensor kinase; Member of a two-component regulatory system. | Cytochrome c family protein. | 0.671 |
Daro_2258 | Daro_2263 | Heavy metal sensor kinase; Member of a two-component regulatory system. | Outer membrane efflux protein. | 0.457 |
Daro_2258 | Daro_2267 | Heavy metal sensor kinase; Member of a two-component regulatory system. | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | 0.462 |
Daro_2258 | Daro_2275 | Heavy metal sensor kinase; Member of a two-component regulatory system. | YHS protein. | 0.515 |
Daro_2258 | Daro_2276 | Heavy metal sensor kinase; Member of a two-component regulatory system. | Conserved hypothetical protein. | 0.694 |
Daro_2258 | Daro_2277 | Heavy metal sensor kinase; Member of a two-component regulatory system. | protein-S-isoprenylcysteine methyltransferase. | 0.567 |
Daro_2258 | Daro_2473 | Heavy metal sensor kinase; Member of a two-component regulatory system. | Heavy metal sensor kinase; Member of a two-component regulatory system. | 0.916 |
Daro_2260 | Daro_2258 | Cytochrome c family protein. | Heavy metal sensor kinase; Member of a two-component regulatory system. | 0.671 |
Daro_2260 | Daro_2263 | Cytochrome c family protein. | Outer membrane efflux protein. | 0.548 |
Daro_2260 | Daro_2267 | Cytochrome c family protein. | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | 0.406 |
Daro_2260 | Daro_2276 | Cytochrome c family protein. | Conserved hypothetical protein. | 0.620 |
Daro_2260 | Daro_2277 | Cytochrome c family protein. | protein-S-isoprenylcysteine methyltransferase. | 0.416 |
Daro_2263 | Daro_2258 | Outer membrane efflux protein. | Heavy metal sensor kinase; Member of a two-component regulatory system. | 0.457 |
Daro_2263 | Daro_2260 | Outer membrane efflux protein. | Cytochrome c family protein. | 0.548 |
Daro_2263 | Daro_2267 | Outer membrane efflux protein. | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | 0.466 |
Daro_2263 | Daro_2276 | Outer membrane efflux protein. | Conserved hypothetical protein. | 0.541 |
Daro_2267 | Daro_2258 | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | Heavy metal sensor kinase; Member of a two-component regulatory system. | 0.462 |
Daro_2267 | Daro_2260 | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | Cytochrome c family protein. | 0.406 |
Daro_2267 | Daro_2263 | ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | Outer membrane efflux protein. | 0.466 |
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