STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daro_3320Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (273 aa)    
Predicted Functional Partners:
Daro_0372
3-hydroxyacyl-CoA dehydrogenase.
 0.965
Daro_2353
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal.
 
 0.958
Daro_0096
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal.
 
 0.957
Daro_0539
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal.
 
 0.957
Daro_0371
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.956
Daro_0100
isovaleryl-CoA dehydrogenase.
 
 0.955
Daro_2354
Enoyl-CoA hydratase.
 
0.954
Daro_1544
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal.
  
 0.946
Daro_2350
3-hydroxyacyl-CoA dehydrogenase.
0.944
Daro_3467
MaoC-like dehydratase.
  
 0.935
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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