Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Daro_0703 | Daro_1105 | Daro_0703 | Daro_1105 | Calcium-binding EF-hand. | Hypothetical protein. | 0.916 |
Daro_0703 | eno | Daro_0703 | Daro_2364 | Calcium-binding EF-hand. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.400 |
Daro_0703 | gmk | Daro_0703 | Daro_3845 | Calcium-binding EF-hand. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.974 |
Daro_0703 | ndk | Daro_0703 | Daro_2989 | Calcium-binding EF-hand. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.892 |
Daro_1105 | Daro_0703 | Daro_1105 | Daro_0703 | Hypothetical protein. | Calcium-binding EF-hand. | 0.916 |
Daro_1105 | gmk | Daro_1105 | Daro_3845 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.949 |
Daro_1105 | ndk | Daro_1105 | Daro_2989 | Hypothetical protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.745 |
Daro_1736 | gmk | Daro_1736 | Daro_3845 | Phosphoribosyltransferase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.940 |
Daro_1736 | guaA | Daro_1736 | Daro_2337 | Phosphoribosyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.957 |
Daro_2117 | Daro_3595 | Daro_2117 | Daro_3595 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.912 |
Daro_2117 | Daro_3843 | Daro_2117 | Daro_3843 | Pyruvate kinase; Belongs to the pyruvate kinase family. | RelA/SpoT protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.903 |
Daro_2117 | eno | Daro_2117 | Daro_2364 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.988 |
Daro_2117 | gmk | Daro_2117 | Daro_3845 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.928 |
Daro_2117 | guaA | Daro_2117 | Daro_2337 | Pyruvate kinase; Belongs to the pyruvate kinase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.489 |
Daro_2117 | ndk | Daro_2117 | Daro_2989 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.906 |
Daro_2117 | rpoZ | Daro_2117 | Daro_3844 | Pyruvate kinase; Belongs to the pyruvate kinase family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.507 |
Daro_3595 | Daro_2117 | Daro_3595 | Daro_2117 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.912 |
Daro_3595 | Daro_3843 | Daro_3595 | Daro_3843 | Pyruvate kinase; Belongs to the pyruvate kinase family. | RelA/SpoT protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.903 |
Daro_3595 | eno | Daro_3595 | Daro_2364 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.987 |
Daro_3595 | gmk | Daro_3595 | Daro_3845 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.929 |
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