STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_0747Cytochrome C. (127 aa)    
Predicted Functional Partners:
DPF_0746
Menaquinol oxidoreductase.
 
    0.985
DPF_0749
Hdr menaquinol oxidoreductase integral membrane subunit.
 
  
 0.975
DPF_0745
Menaquinol oxidoreductase.
 
    0.953
DPF_0748
4Fe-4S ferredoxin.
 
  
 0.951
DPF_0744
Hypothetical protein.
 
     0.922
DPF_0754
Sulfite reductase.
 
    0.821
DPF_0755
Sulfite reductase.
 
    0.819
DPF_0116
Sulfite reductase.
 
     0.745
DPF_0472
Hypothetical protein.
  
     0.745
DPF_1701
Hypothetical protein.
  
     0.585
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.